PhD-led · Research-focused · Worldwide support
I help research teams turn sequencing data into reproducible analyses, clear biological interpretation and publication-ready results — with organised reports, figures, tables and documented workflows.
Research support built around your question
Support is tailored for projects at the planning stage, datasets awaiting analysis and studies that need a clear route from raw reads to scientifically defensible results.
For investigators, postdoctoral researchers and students who need rigorous support for RNA-seq, small RNA, genome or microbiome projects, from study planning to manuscript-ready results.
For groups studying pathogens, beneficial microbes, fungal systems, lichen symbioses or host–microbe interactions that need assembly, annotation, comparative genomics or transcriptomic interpretation.
For teams needing dependable overflow or white-label analytical support, with defined deliverables, reproducible workflows and a clear handover for their own clients or collaborators.
Select the analytical pathway that fits your research question. Every workflow is tailored to the organism, study design, available data and reporting requirements.
From FASTQ quality control and quantification to differential expression, enrichment analysis, biological interpretation and manuscript-ready visualisation.
Learn moreAssembly, quality assessment, annotation and comparative analysis for bacterial, fungal and plant genomes, including phylogenomics and function-focused interpretation where appropriate.
Learn moreSpecialised analysis of miRNA, siRNA and exosome-derived RNA, including discovery, locus profiling, differential analysis and clear visual reporting.
Learn moreBegin with high-level information only: organism, data type, sample number, research question and deadline. You will receive a proposed analysis route, practical deliverables and a milestone-based quotation before work begins.
These are common project pathways. The final scope is based on study design, sample number, organism, data quality, analytical depth and the outputs needed for your research goal.
Scope and quotation after project review
Scope and quotation after project review
Scope and quotation after project review
The objective is not merely to run a pipeline, but to provide a transparent analytical record and results that can be understood, reviewed and used in the next stage of research.
Analysis informed by a research background in genomics, microbiology, transcriptomics and plant–microbe interactions.
Clear Bash, R and Python workflows with documented outputs, parameters and analysis steps where appropriate.
Figures, tables and concise reports designed to support manuscripts, presentations, grant reports and scientific discussion.
Defined scope, confidential handling, written milestones and secure payment options for new projects.
Computational biologist and bioinformatics consultant with more than a decade of research experience across genomics, transcriptomics, microbiome analysis and plant–microbe interactions.
I’m Dr. Manish Ranjan, a computational biologist and bioinformatics consultant. I help research teams transform complex sequencing datasets into clear, reproducible and publication-quality evidence.
My core areas include RNA-seq, small RNA and exosome RNA analysis, microbial and fungal genomics, comparative genomics, metagenomics, phylogenetics and custom Bash/R/Python workflows.
Each engagement begins with the biological question and study design, then moves through quality control, analysis, interpretation and a structured handover of results for academic labs, research-focused biotech and collaborators.
These examples show the kinds of questions and deliverables that can be supported. Client datasets remain confidential; anonymised or public demonstration outputs can be discussed where appropriate.
From FASTQ quality control to count matrices, differential expression, enrichment analysis, PCA, heatmaps, volcano plots and a clear research-ready summary.
Discuss Similar ProjectAssembly, quality assessment, annotation, AMR/plasmid/BGC screening, pan-genome comparison, phylogenetics and publication-ready comparative summaries.
Discuss Similar ProjectAdapter processing, miRNA/siRNA discovery or locus profiling, expression analysis, differential analysis and publication-ready visualisation.
Discuss Similar ProjectA defined workflow keeps the research question, deliverables, communication and payment milestones clear for both parties.
Study design, metadata, sample number, organism, available files, expected outputs and deadline are reviewed.
A written scope outlines deliverables, assumptions, timeline, revisions and a practical milestone structure.
For new clients, work begins after an advance payment or funded milestone through an agreed secure route.
QC summaries, preliminary outputs, scripts and analysis updates are shared according to the agreed scope.
Final reports, tables, figures, editable files and agreed workflow documentation are released after milestone approval.
For first-time international clients, milestone-based escrow through Upwork Direct Contract or Kolabtree is preferred. For Indian clients, bank transfer/UPI with invoice may be used. At the initial enquiry stage, please share project details rather than raw sequencing data; a suitable confidential transfer route can be agreed after scope confirmation.
Browse peer-reviewed publications, methods and applications in genomics, transcriptomics and systems biology.
Explore previous projects, collaborations and endorsements. Connect to discuss timelines, budgets and technical scope for your datasets.
Share your organism, data type, sample number, research question, available files and deadline. No raw data are needed at this first step; you will receive guidance on the suitable workflow and next steps.
Request a Confidential Project Review